PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A08G1474
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family Trihelix
Protein Properties Length: 340aa    MW: 37920 Da    PI: 7.9857
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A08G1474genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.94.1e-1619107186
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  +W+k+e l+Liea++e++ +lr ++lk+ +W +vs+++   +     +s++q ++k+e+l++r++++k+++ k+  + ss++ +f  l+
  Gh_A08G1474  19 CWSKEESLVLIEAYKEKWFALRCQNLKASDWGAVSAAVssaSGPETMKSSVQYRHKIEKLRQRFRAEKQRSLKNPGKFSSSWDLFPLLD 107
                  7*************************************7544445689*************************99999******98775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138378.4E-1618107No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MATPQSCSAT ATQRVAPPCW SKEESLVLIE AYKEKWFALR CQNLKASDWG AVSAAVSSAS  60
GPETMKSSVQ YRHKIEKLRQ RFRAEKQRSL KNPGKFSSSW DLFPLLDCMN FVPLSVNGSA  120
DQDNLYYNKD GGFYWKLKNH ENIYGNSGSD LGFDHCLSGG FSQGIDSVGL GKAPLKTLGD  180
KSCMNLGFKP KNHGSSNLNY DYDNDLQEYV DEGMGFQAKV SDAWDSVPRG FHQKKCGVVD  240
RSFNPGVDDY RGLNGFASCS SPELGVKNGN GGVKRGMDPV EEMVSSIKLL AEGFVRMEKM  300
KIEMVKDIEK TRMKMEMKHN EMTLESRQKI MDVFANALLE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007039670.11e-152Alcohol dehydrogenase transcription factor Myb/SANT family protein, putative
TrEMBLA0A061G3R01e-152A0A061G3R0_THECC; Alcohol dehydrogenase transcription factor Myb/SANT family protein, putative
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM104831828
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.11e-20Trihelix family protein